Okay so I 100% resolved it. Here is what I did.
First here is the layout of my song.

Intro: bars 1 to 16
Chorus: bars 17 to 112
Tag Ending: bars 113 to 176.
Chorus repeats were set to 3.

Step1: I removed the tag ending buy unchecking it. I also uncheck the "generate ending" check box.
Step2: I set the chorus repeats to 1 and I answer yes to adjust the melody.
Step3: I set the new chorus setting to bars 1 to 176. Set the 1 first then set the 176.

I just tested playing the song and I hear all the melody notes I entered without any missing at all.

So now all I have to do is to find the bars to copy my notes and get it all perfect then use the procedure described in the 2nd post to get it set up properly again.

This is a very useful thread. I will create a link to it in my reminder database so I can quickly come back and read the procedure.

Last edited by bowlesj; 06/15/19 05:09 AM.
John Bowles
My playing in my 20s:
https://www.reverbnation.com/johnbowles