I'm not really answering my own thread, but I think it was just a bug, unless someone knows better.

I just reconfigured the song using Song Form, got all the measures following the progression, hooray, but a lot of anomalies popped up - measures appearing that I hadn't specified, etc.


iMac, MOTU 828 MkII, Western Drive EHD, M-Audio Axiom 25, plus too many instruments, mics, leads, crap, etc.