From what I have seen, the only thing you can use to control it from the controller is keys. There does nto seem to be any capacity to assign, say, buttons knobs or switches (mapped with CC #'s) to any of the controls within Conductor.
IE, only keys themselves or the qwerty keyboard seem to be the options.
You are correct. I may have misspoke - 3 ways to control conductor is with the menu, qwerty and keyboard. I was thinking a controller such as I have, it has keys would work the same as a regular keyboard.