I think I got it fixed. Although it was not a mis-aligned bars issue as all the strums and chord changes were happening in the right spots and in time. Your tutorial did gave me some clues in the right direction. I have BIAB set to 240 tics per 1/4 beat and Reaper was set to 960. I simply set Reaper to 240 tics per beat, deleted the track, inserted a new black track and drag/dropped the same midi file from my directory to the TCP again.
No more clicking sounds. At least for now. I'll have to check it thoroughly after I wake up.
Thanks for your help.

Last edited by Tobias; 10/29/16 08:51 PM.

Does the noise in your head bother me ?